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1.
J Asthma Allergy ; 16: 775-788, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37534326

RESUMO

Background: Rape pollen allergy is a common allergic reaction disorder that affects the health and life of patients seriously. The research on ceRNA regulatory network in rape pollen allergy is poor. Methods: High throughput whole-transcriptome sequencing was conducted on rape pollen allergic samples and non-allergic samples. Differentially expressed microRNAs (DEmiRNAs), circRNAs (DEcircRNAs), long non-coding RNA (DElncRNAs), mRNA (DEmRNAs) were identified and a ceRNA regulatory network was constructed by Cytoscape. Functional enrichment analyses were performed on DEmRNAs in the ceRNA network. Then, the least absolute shrinkage and selection operator (LASSO) regression model was used to identify characteristic genes for rape pollen allergy. The receiver operating characteristic (ROC) curve was used to evaluate the diagnostic ability of characteristic genes. Results: A total of 25 DEmiRNAs, 258 DEcircRNAs, 304 DElncRNAs, and 383 DEmRNAs in the allergic group compared with the non-allergic group were uncovered, respectively. A ceRNA network containing 21 miRNAs, 57 circRNAs, 28 lncRNAs, and 33 mRNAs was generated with 139 nodes and 160 edges. The signal transduction-related processes, immune-related processes, the ion, inorganic substance, and hormone regulation processes were associated with mRNAs in the ceRNA network. The results of pathway enrichment illustrated that mRNAs in the ceRNA were significantly linked to IL-17 signaling pathway, inflammatory mediator regulation of trp channels, GMP-PKG signaling pathway, signaling by GPCR, and GPCR downstream signaling pathway. Then, five characteristic genes (KCNQ3, CCR5, FOSB, CFAP43, and PRKG1) were defined by the LASSO algorithm. The AUC values of these genes indicated that these genes had a powerful discrimination ability in discriminating allergic samples from non-allergic samples. Conclusion: Taken together, we revealed the ceRNA regulatory network in rape pollen allergy and excavated five characteristic genes (KCNQ3, CCR5, FOSB, CFAP43, and PRKG1) with the diagnostic value that may be a potential target in diagnosis and treatment.

2.
J Int Adv Otol ; 19(3): 255-259, 2023 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-37272645

RESUMO

Waardenburg syndrome is an autosomal dominant inherited syndromic hereditary hearing loss characterized by varying combinations of sensorineural hearing loss and abnormal pigmentation of the hair, skin, and inner ear. The aim of this study was to analyze the clinical phenotypes and genetic variants of a Chinese boy with Waardenburg syndrome type 2 and to explore the possible molecular pathogenesis of Waardenburg syndrome type 2. Clinical, audiological, and ophthalmologic evaluations were performed on the proband. Clinical data from the principal members in the proband's family were collected through questionnaires. Genetic analysis was conducted, including targeted next-generation sequencing of 144 known deafness genes, Sanger sequencing, and bioinformatic analysis. Waardenburg syndrome type 2was diagnosed in a 4-year-old boy according to the Waardenburg Syndrome Consortium Criteria. The novel missense mutation c.426G>T (p.Trp142Cys) was identified in SOX10 in the proband but was absent in his parents and the controls. A de novo missense mutation in SOX10 was the genetic cause of Waardenburg syndrome type 2 in the proband, which was useful for the molecular diagnosis of Waardenburg syndrome type 2.


Assuntos
Perda Auditiva Neurossensorial , Fatores de Transcrição SOXE , Síndrome de Waardenburg , Humanos , População do Leste Asiático , Perda Auditiva Neurossensorial/diagnóstico , Perda Auditiva Neurossensorial/genética , Mutação , Fenótipo , Fatores de Transcrição SOXE/genética , Síndrome de Waardenburg/diagnóstico , Síndrome de Waardenburg/genética , Masculino , Pré-Escolar
3.
Funct Integr Genomics ; 23(2): 138, 2023 Apr 27.
Artigo em Inglês | MEDLINE | ID: mdl-37106264

RESUMO

In this study, the bacterial diversity of acquired middle ear cholesteatoma (MEC) was evaluated to reveal its pathogenesis and provides a guide for the use of antibiotics. Twenty-nine cases of acquired MEC and eight cases of healthy middle ears undergoing cochlear implantation (CI) were evaluated. Full-length 16S rRNA gene sequencing was performed to profile the bacterial communities in lesions and healthy tissues of the middle ear. ACE (P = 0.043) and Chao1 (P = 0.039) indices showed significant differences in alpha diversity (P < 0.05). Analysis of PERMANOVA/Anosim using the Bray-Curtis distance matrix results suggested that the between-group differences were greater than the within-group differences (R = 0.238, P < 0.05, R2 = 0.066, P < 0.05). Bacterial community analysis revealed that Alphaproteobacteria at the class level and Caulobacterales and Sphingomonadales at the order level were significantly different (P < 0.05). In the LefSe (Linear discriminant analysis effect size) analysis, Porphyromonas bennonis was elevated, and Bryum argenteum and unclassified Cyanobacteriales were reduced at the species level in MEC (P < 0.05). Fifteen metabolic pathways were found to be significantly different between the two groups by analysing the abundance of metabolic pathways in level 2 of the Kyoto Encyclopaedia of Genes and Genomes (KEGG). Seven and eight metabolic pathways were significantly elevated in the MEC and control groups, respectively (P < 0.05). The role of bacteria in the pathogenesis of acquired MEC was further refined through analysis of metabolic pathways. These findings indicate that the acquired MEC and healthy middle ear contain more diverse microbial communities than previously thought.


Assuntos
Colesteatoma da Orelha Média , Humanos , Colesteatoma da Orelha Média/genética , RNA Ribossômico 16S/genética , Genes de RNAr , Bactérias/genética , China
4.
Artigo em Chinês | MEDLINE | ID: mdl-36756822

RESUMO

Objective:To analyze the consistency of pepsin assay kit, pepsin IHC, reflux symptom index(RSI) and reflux finding score(RFS) in the diagnosis of laryngopharyngeal reflux disease(LPRD). Methods:The clinical data of 61 inpatients with laryngeal diseases who were admitted to the Department of Otolaryngology, the First Affiliated Hospital of Kunming Medical University from May 2020 to December 2021 were retrospectively analyzed. The RSI and RFS scores, the Formwitz score of pepsin immunohistochemistry, and the results of pepsin detection kit were recorded. ICC group correlation coefficient and Kappa consistency analysis was used for three detection methods. Results:Among 61 patients, 30 cases were positive and 31 cases were negative for the pepsin test kit, with a positive rate of 49.18%. The positive rate of pepsin immunohistochemistry was 45.90%(28/61), and the diagnostic agreement rate between the two was 70.49%. The consistency between them was high(κ=0.409). The positive rate of RSI and RFS in diagnosing LPRD was 62.30%(38/61), and the consistency rate was 73.77% with pepsin detection kit. The consistency between them was high(κ=0.486). Taking pepsin IHC as the reference standard, the sensitivity, specificity, positive predictive value and negative predictive value of pepsin detection kit were 71.43%(20/28), 69.70%(23/33), 66.67%(20/30) and 74.19%(23/31), respectively. Using RSI and RFS scales as reference criteria, the sensitivity, specificity, positive predictive value and negative predictive value of pepsin detection kit were 89.29%(25/28), 60.61%(20/33), 65.79%(25/38) and 86.96%(20/23), respectively. Analysis of correlation coefficient within ICC group: ICC value was 0.628, 95% confidence interval(0.497-0.741), the three methods have good consistency. Conclusion:The RSI and RFS scale scores were in good agreement with the pepsin test kit, and the pepsin test kit was also in good agreement with pepsin immunohistochemistry. As a non-invasive diagnostic technique, the pepsin test kit can be widely used in the diagnosis of pharyngeal reflux in combination with pepsin immunohistochemistry and RSI and RFS scale.


Assuntos
Refluxo Laringofaríngeo , Humanos , Refluxo Laringofaríngeo/diagnóstico , Pepsina A/análise , Estudos Retrospectivos , Imuno-Histoquímica , Faringe
5.
Ear Nose Throat J ; : 1455613231158797, 2023 Feb 22.
Artigo em Inglês | MEDLINE | ID: mdl-36812427

RESUMO

Spontaneous cerebrospinal fluid (CSF) leak is a condition that commonly presents with unilateral watery drainage from the nose or ear, tinnitus, and stuffy ears or hearing loss. Spontaneous CSF rhinorrhea and otorrhea together are rare. A 64-year-old woman presented at our department with complaints of clear watery rhinorrhea and hearing loss on the right side persisting for 10 months. Imaging and surgery were used to diagnose the condition. Through surgical treatment, she was eventually cured. Review of the literature has shown that patients with both nasal and aural CSF leaks are rare. When a patient presents with both unilateral watery drainage from both the nose and ear, a diagnosis of CSF rhinorrhea and otorrhea should be considered. This case report will benefit clinicians by providing more information to assist with diagnosing the disease.

6.
Artigo em Chinês | MEDLINE | ID: mdl-36597366

RESUMO

Objective:To analyze the clinical characteristics, treatment and prognosis of the otolaryngology head and neck malignant tumors in children, in order to improve the diagnosis and treatment of the diseases. Methods:The patients of otorhinolaryngology head and neck malignant solid tumors under 14 years old hospitalized in Kunming Children's Hospital and the First Affiliated Hospital of Kunming Medical University from 2014 to 2020 were retrospectively analyzed. All cases were statistically analyzed according to gender, age, location, pathological type and treatment method. Results:The main clinical manifestations of 91 children were mainly facial and neck masses, including nasal congestion, swallowing discomfort, and continuous intermittent fever. CT and MRI examination showed that the diameter of the tumor was 1.2 cm ×2.0 cm to 5.0 cm×12.0 cm, with a mean of 2.8 cm×3.2 cm, and 19 cases had distant metastasis. The main tissue sources were soft tissue (56 cases) and epithelial tissue (35 cases). There were 6 pathological types, the most common was sarcoma (41 cases), followed by neuroblastoma (15 cases), papillary carcinoma (14 cases), squamous cell carcinoma (10 cases), mucoepidermoid carcinoma (8 cases), and adenocarcinoma (3 cases). According to the classification of tissue origin, the statistical analysis of gender and pathological type showed statistically significant differences in both gender and pathological types(P<0.01). Conclusion:The age of onset, primary site, tissue origin and pathological type of otolaryngology head and neck malignancy in children have their own characteristics, which should be comprehensively evaluated and treated with multidisciplinary treatment.


Assuntos
Adenocarcinoma , Neoplasias de Cabeça e Pescoço , Sarcoma , Humanos , Criança , Adolescente , Estudos Retrospectivos , Neoplasias de Cabeça e Pescoço/diagnóstico , Neoplasias de Cabeça e Pescoço/terapia , Prognóstico
7.
Nat Commun ; 14(1): 431, 2023 01 26.
Artigo em Inglês | MEDLINE | ID: mdl-36702827

RESUMO

To better understand how amino acid sequence encodes protein structure, we engineered mutational pathways that connect three common folds (3α, ß-grasp, and α/ß-plait). The structures of proteins at high sequence-identity intersections in the pathways (nodes) were determined using NMR spectroscopy and analyzed for stability and function. To generate nodes, the amino acid sequence encoding a smaller fold is embedded in the structure of an ~50% larger fold and a new sequence compatible with two sets of native interactions is designed. This generates protein pairs with a 3α or ß-grasp fold in the smaller form but an α/ß-plait fold in the larger form. Further, embedding smaller antagonistic folds creates critical states in the larger folds such that single amino acid substitutions can switch both their fold and function. The results help explain the underlying ambiguity in the protein folding code and show that new protein structures can evolve via abrupt fold switching.


Assuntos
Dobramento de Proteína , Proteínas , Proteínas/metabolismo , Sequência de Aminoácidos , Proteína Estafilocócica A , Mutação
8.
Ear Nose Throat J ; : 1455613221137225, 2022 Nov 24.
Artigo em Inglês | MEDLINE | ID: mdl-36420695

RESUMO

Gout nodules (tophi) are formed by a chronic inflammatory reaction in tissues resulting in deposition of urate crystals. They are commonly seen in joints and surrounding tissues, subcutaneous tissues, as well as the pinna and kidney, and are characteristic manifestations of gout. Vocal cord tophi are rarely reported in the literature, and patients often present with hoarseness, progressive dysphagia, and other symptoms. We report a case of a vocal cord mass found by gastroscopy in a patient with a history of gout for more than 20 years. Postoperative pathological findings were vocal cord tophi. Tophi can have serious consequences and should be included in the differential diagnosis of laryngeal masses in patients with a history of gout. Therapy should involve a combination of systemic uric acid-lowering treatment and surgery to improve symptoms and reduce recurrence.

9.
Artigo em Chinês | MEDLINE | ID: mdl-35511622

RESUMO

Objective:To evaluate the preliminary value of the cross-sectional area and morphological changes of the external ear canal opening after the two-flap auriculoplasty through the I shaped posterior incision. Methods:One hundred and thirty-seven patients(a total of 155 ears) who received open radical mastoidectomy in the department of otolaryngology in the First Affiliated Hospital of Kunming Medical University were treated with I shaped incision and two-flap auriculoplasty. Vertical diameter(D1) and horizontal diameter(D2) of the external ear canal were measured at the completion of surgery, 1 month and 6 months post-operation, respectively. The cross-sectional area(S=1/4πD1×D2) of the external ear canal was calculated according to the two diameters. The dry ear time and intraoperative lumen epithelialization time were observed after operation. At 6 months after operation, the morphology of the external ear canal opening was analyzed. Results:The postoperative dry ear duration was 18-61 days(27.32±7.52) days. The time to complete epithelialization of the operative cavity was 24-70 days(32.18±10.36) days. Six months after the operation, the morphological classification of 155 outer ear meatal openings was as follows: 117 ears( 75.48%) were round(the difference between vertical diameter and horizontal diameter was within 2 mm); Oval(oval appearance, difference between vertical diameter and horizontal diameter greater than 2 mm) 35 ears(22.58%), triangle 3 ears(1.94%); Irregular ear canal orifice was not observed in all cases. During the operation, and at 1 month and 6 months after the operation, the cross-sectional area of the external ear canal was(2.51±0.48) cm², (2.45±0.35) cm², (2.41±0.43) cm², respectively. And no significant differences were observed. (P>0.05). Conclusion:The I shaped posterior auricular incision and two-flap auricular lumenoplasty is not compex and easy to perform. The morphology of the external ear opening is regular after the operation, which can effectively match the ventilation of the operative cavity.


Assuntos
Pavilhão Auricular , Meato Acústico Externo , Pavilhão Auricular/cirurgia , Meato Acústico Externo/cirurgia , Humanos , Processo Mastoide/cirurgia , Mastoidectomia , Timpanoplastia
10.
Exp Ther Med ; 22(6): 1360, 2021 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-34659506

RESUMO

Acute otitis media (AOM) is a common infectious disease in children that is accompanied by signs and symptoms of middle ear inflammation and infection. Previous studies have shown that the long non-coding (lnc)RNA nuclear-enriched abundant transcript 1(NEAT1) participates in various inflammatory conditions and plays an important regulatory role. The focus of the present study was the biological function of NEAT1 and underlying molecular mechanism in lipopolysaccharide (LPS)-induced human middle ear epithelial cells (HMEECs). The expression of NEAT1, miR-301b-3p and toll-like receptor 4 (TLR4) protein were determined by reverse transcription-quantitative PCR and western blot assays, respectively. Dual-luciferase reporter assay was performed to investigate the combination of miR-301b-3p and NEAT1 or TLR4. In addition, cell viability, apoptosis and the levels of pro-inflammatory factors (IL-1ß, TNF-α and IL-6) were measured by Cell Counting Kit-8 assay, flow cytometry and ELISA, respectively. Cell viability was significantly decreased, whereas apoptosis and inflammation were increased in LPS-stimulated HMEECs. Functional analyses demonstrated that NEAT1 was upregulated following LPS treatment, whereas knockdown of NEAT1 significantly increased cell viability and alleviated apoptosis and inflammation. Mechanistically, NEAT1 directly bound to and negatively regulated miR-301b-3p expression, whereas miR-301b-3p inhibitors abolished the inhibitory effect of NEAT1 knockdown on cell apoptosis and inflammation. As a target of miR-301b-3p, TLR4 was regulated by NEAT1 and miR-301b-3p. TLR4 overexpression alleviated NEAT1 silencing-induced inflammatory suppression. Rescue experiments demonstrated that NEAT1 promoted TLR4 expression by inhibiting miR-301b-3p. Collectively, the results of the present study suggested that NEAT1 may attenuate LPS-induced inflammation and apoptosis in HMEECs by modulating the miR-301b-3p/TLR4 axis, and may provide a new therapeutic target for the clinical treatment of AOM.

11.
Int J Pediatr Otorhinolaryngol ; 147: 110758, 2021 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-34038854

RESUMO

OBJECTIVES: To determine the clinical characteristics and genetic causes of Waardenburg syndrome type 1 (WS1) present in a Chinese Han family. METHODS: Evaluations, including the familial history, clinical features and audiological tests, were performed on the proband and her parents. Genetic analyses were conducted using targeted next-generation sequencing of 144 known deafness genes, and confirmed by Sanger sequencing. Bioinformatics analyses of the candidate variant were performed. RESULTS: The proband suffered from moderate hearing loss of the right ear, and her mother suffered from profound congenital bilateral hearing loss. The proband exhibited a left blue iris. The calculated W index of the proband was 2.61, while her mother's W index was 2.12. The proband and her mother were diagnosed with WS1 according to the Waardenburg Syndrome Consortium criteria. A novel missense variant NM_181457.3: c.127G > T; p.(Gly43Cys) in exon 2 in Paired Box 3 (PAX3) was identified in the proband and her mother, but this variant was not detected in the father and the controls. This variant was not reported in the HGMD, ClinVar, 1000G and ESP6500 databases. CONCLUSION: We identified a novel missense variant in exon 2 of PAX3 as the genetic cause of WS1 in this two-generation family, which broadened the genetic spectrum of WS1.


Assuntos
Síndrome de Waardenburg , China , Feminino , Humanos , Mutação , Fator de Transcrição PAX3/genética , Linhagem , Síndrome de Waardenburg/genética
12.
Int J Mol Med ; 48(1)2021 07.
Artigo em Inglês | MEDLINE | ID: mdl-33982786

RESUMO

Matrix metalloproteinase (MMP)­9 is a key enzyme responsible for extracellular matrix degradation and contributes to the progressive histological changes observed in lower respiratory tract infections. Integrin ß1 and α­tubulin are potential MMP­9­interacting proteins, and microRNA (miR)­29b­3p can regulate MMP­9 expression. MMP­9 is highly expressed in chronic rhinosinusitis with nasal polyps (CRSwNPs), regardless of its effects on miR­29b­3p, integrin ß1 and α­tubulin expression. In the present study, samples from 100 patients with CRSwNPs were examined via reverse transcription­quantitative PCR to assess the mRNA expression of miR­29b­3p, and western blotting was performed to assess the protein expression of MMP­2, MMP­9, acetyl­α­tubulin, integrin ß1 and tissue inhibitor of metalloproteinase 1 (TIMP­1). A dual­luciferase reporter assay was used to verify the direct binding of miR­29b­3p and MMP­2/MMP­9. Co­immunoprecipitation (Co­IP) and GST pull­down assays showed that integrin ß1 and α­tubulin were MMP­9­interacting proteins. Cell viability, apoptosis and inflammatory cytokine levels were determined via a Cell Counting Kit­8 assay, flow cytometry and ELISA, respectively. miR­29b­3p expression was found to be positively correlated with MMP­2 and MMP­9 expression. Whereas, TIMP­1 expression was negatively correlated with MMP­2 and MMP­9 expression. The dual­luciferase assay revealed that miR­29b­3p targeted the 3' untranslated region of MMP­2/MMP­9. The Co­IP and GST pull­down assays showed that MMP­9 could directly bind to integrin ß1 and indirectly bind to α­tubulin. Finally, the overexpression of miR­29b­3p decreased the expression of MMP­9 and increased the levels of acetyl­α­tubulin. By contrast, the knockdown of miR­29b­3p increased the expression of MMP­9 and decreased the levels of acetyl­α­tubulin. Additionally, MMP­9 expression was found to be negatively correlated with acetyl­α­tubulin expression. Of note, the expression of integrin ß1 did not change following the overexpression and knockdown of MMP­9. Finally, the overexpression of miR­29b­3p not only decreased MMP­9 expression, but also alleviated lipopolysaccharide­induced inflammation in NP69 cells. The results showed that the downregulation of miR­29b­3p promoted α­tubulin deacetylation by increasing the number of MMP­9­integrin ß1 complexes in CRSwNPs, thus targeting miR­29b­3p/MMP­9 may be a potential novel strategy for the clinical treatment of CRSwNPs.


Assuntos
Integrina beta1/metabolismo , Metaloproteinase 9 da Matriz/metabolismo , Pólipos Nasais/etiologia , Sinusite/etiologia , Tubulina (Proteína)/metabolismo , Regiões 3' não Traduzidas/genética , Acetilação , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Apoptose , Regulação para Baixo , Feminino , Humanos , Inflamação/induzido quimicamente , Integrina beta1/genética , Lipopolissacarídeos/efeitos adversos , Masculino , Metaloproteinase 9 da Matriz/genética , MicroRNAs/genética , MicroRNAs/metabolismo , Pessoa de Meia-Idade , Tubulina (Proteína)/genética , Adulto Jovem
13.
Commun Biol ; 4(1): 299, 2021 03 05.
Artigo em Inglês | MEDLINE | ID: mdl-33674772

RESUMO

We describe the design, kinetic properties, and structures of engineered subtilisin proteases that degrade the active form of RAS by cleaving a conserved sequence in switch 2. RAS is a signaling protein that, when mutated, drives a third of human cancers. To generate high specificity for the RAS target sequence, the active site was modified to be dependent on a cofactor (imidazole or nitrite) and protease sub-sites were engineered to create a linkage between substrate and cofactor binding. Selective proteolysis of active RAS arises from a 2-step process wherein sub-site interactions promote productive binding of the cofactor, enabling cleavage. Proteases engineered in this way specifically cleave active RAS in vitro, deplete the level of RAS in a bacterial reporter system, and also degrade RAS in human cell culture. Although these proteases target active RAS, the underlying design principles are fundamental and will be adaptable to many target proteins.


Assuntos
Engenharia de Proteínas , Proteínas Proto-Oncogênicas p21(ras)/metabolismo , Subtilisina/metabolismo , Células HEK293 , Humanos , Cinética , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Proteólise , Proteínas Proto-Oncogênicas p21(ras)/genética , Especificidade por Substrato , Subtilisina/genética
14.
Biosci Rep ; 41(6)2021 06 25.
Artigo em Inglês | MEDLINE | ID: mdl-33345266

RESUMO

Waardenburg syndrome (WS) is a congenital hereditary disease, attributed to the most common symptoms of sensorineural deafness and iris hypopigmentation. It is also known as the hearing-pigmentation deficient syndrome. Mutations on SOXl0 gene often lead to congenital deafness and has been shown to play an important role in the pathogenesis of WS. We investigated one family of five members, with four patients exhibiting the classic form of WS2, whose DNA samples were analyzed by the technique of Whole-exome sequencing (WES). From analysis of WES data, we found that both the mother and all three children in the family have a heterozygous mutation on the Sex Determining Region Y - Box 10 (SOX10) gene. The mutation was c.298_300delinsGG in exon 2 of SOX10 (NM_006941), which leads to a frameshift of nine nucleotides, hence the amino acids (p. S100Rfs*9) are altered and the protein translation may be terminated prematurely. Further flow cytometry confirmed significant down-regulation of SOX10 protein, which indicated the SOX10 gene mutation was responsible for the pathogenesis of WS2 patients. In addition, we speculated that some other mutated genes might be related to disease phenotype in this family, which might also participate in promoting the progression of WS2.


Assuntos
Mutação da Fase de Leitura , Fatores de Transcrição SOXE/genética , Síndrome de Waardenburg/genética , Povo Asiático/genética , China , Análise Mutacional de DNA , Progressão da Doença , Heterogeneidade Genética , Predisposição Genética para Doença , Hereditariedade , Heterozigoto , Humanos , Linhagem , Fenótipo , Fatores de Transcrição SOXE/sangue , Síndrome de Waardenburg/sangue , Síndrome de Waardenburg/diagnóstico , Síndrome de Waardenburg/etnologia , Sequenciamento do Exoma
15.
Genet Test Mol Biomarkers ; 24(5): 249-255, 2020 May.
Artigo em Inglês | MEDLINE | ID: mdl-32250160

RESUMO

Aims: To determine the clinical characteristics and genetic cause of Waardenburg syndrome type 1 (WS1) in a Chinese family. Materials and Methods: Evaluations, including history, clinical features, and audiological tests, were performed on the proband and her parents. Genetic analyses were performed targeting 144 known deafness genes using a next-generation sequencing panel. Bioinformatic analyses were used to analyze the candidate mutation. Results: The proband and her parents suffered from congenital bilateral profound hearing loss. Her mother exhibited bilateral blue irides. WS1 was diagnosed in the proband and her mother according to the Waardenburg syndrome consortium criteria: the calculated W index of the proband was 2.39 and that of her mother was 2.31. A novel mutation c.1076_1077del (p.Thr359fs) in exon 7 of the PAX3 gene (paired box 3) was identified in the proband and her mother that was absent in the father and controls. Conclusion: Mutations in exon 7 of the PAX3 gene are rare. We identified a novel frameshift mutation in exon 7 of the PAX3 gene that we determined was responsible for WS1 in this family.


Assuntos
Fator de Transcrição PAX3/genética , Síndrome de Waardenburg/genética , Povo Asiático/genética , China , Éxons/genética , Família , Feminino , Testes Genéticos/métodos , Sequenciamento de Nucleotídeos em Larga Escala/métodos , Humanos , Masculino , Mutação , Fator de Transcrição PAX3/metabolismo , Linhagem , Síndrome de Waardenburg/metabolismo
16.
Mol Genet Genomic Med ; 7(7): e00798, 2019 07.
Artigo em Inglês | MEDLINE | ID: mdl-31190477

RESUMO

BACKGROUND: To analyze the clinical phenotypes and genetic variants of a Chinese family with Waardenburg syndrome (WS) and to explore the possible molecular pathogenesis of WS. METHODS: The clinical data from a patient and his family were collected. The genomic DNA of the patient and his family was purified from their peripheral blood. All exons and flanking sequences of the MITF, PAX3, SOX10, SNAI2, END3, and EDNRB genes were investigated through high-throughput sequencing. Based on the results of high-throughput sequencing, genetic variants in the patient and his family were verified and analyzed by Sanger sequencing. RESULTS: The patient was diagnosed with typical WS1 that manifested in hearing impairment, inner canthus ectopia and heterochromic iris. Sanger sequencing revealed the pathogenic heterozygous c.420-424de1CGCGGinsTTAC mutation in the PAX3 gene in the proband, which is a frameshift mutation that changed the amino acid sequence of the PAX3 protein from AVCDRNTVPSV to YSVIETPCRQ* (* refers to a stop codon) from amino acids 141-151. The stop codon induced by this mutation resulted in the truncation of the PAX3 protein. The same mutation sites were also found in the mother and younger sister of the proband. No previous report of this mutation was found in the Human Gene Mutation Database. CONCLUSION: The novel heterozygous c.420-424de1CGCGGinsTTAC mutation is the molecular pathological cause for WS1 in our patient. The clinical and genetic characterization of this family with WS1 elucidated the genetic heterogeneity of PAX3 in WS1. Moreover, the mutation detected in this case has expanded the database of PAX3 mutations.


Assuntos
Deleção de Genes , Fator de Transcrição PAX3/genética , Síndrome de Waardenburg/genética , Adolescente , Adulto , Criança , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Linhagem , Fenótipo , Síndrome de Waardenburg/patologia
17.
Mol Med Rep ; 19(3): 1775-1780, 2019 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-30628718

RESUMO

Waardenburg syndrome type 2 (WS2) is a rare genetic disorder, characterized by bright blue eyes, moderate to profound hearing loss and pigmental abnormalities of the hair and skin. Between 10 and 20 mutations in the SRY­box 10 (SOX10) gene were previously identified to be associated with WS2. The present study aimed to identify the genetic causes of WS2 in a Chinese family. Clinical and molecular analyses were performed to genetically characterize a Chinese family with two cases of WS2. The clinical data of the proband were collected using a questionnaire. The genomic DNA was extracted from peripheral blood samples of each individual in the family, and 168 candidate genes associated with hearing loss were sequenced using the Illumina HiSeq 2000 and confirmed by Sanger sequencing. A heterozygous nonsense mutation [substitution; position 127; cytosine to thymine (c.127C>T)] was identified in exon 2 of SOX10 (transcript ID: NM_006941.3) in the proband and the mother; however, not in other family members or healthy controls. The novel nonsense heterozygous mutation may cause the replacement of codon 43 [arginine (Arg)] with a stop codon (Arg43stop), leading to premature termination of protein translation. The novel nonsense heterozygous mutation c.127C>T in the SOX10 gene was considered to be the cause of WS2 in the family. This mutation has not been identified in any databases, to the best of the authors' knowledge, including The Single Nucleotide Polymorphism Database, The Human Gene Mutation Database, 1000 Genomes Project and ClinVar and Exome Sequencing Project v. 6500.


Assuntos
Cor de Olho/genética , Predisposição Genética para Doença , Fatores de Transcrição SOXE/genética , Síndrome de Waardenburg/genética , China , Éxons/genética , Feminino , Heterozigoto , Humanos , Masculino , Mutação , Linhagem , Síndrome de Waardenburg/patologia
18.
Oncol Rep ; 37(3): 1653-1661, 2017 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-28098869

RESUMO

Pediatric head and neck cancers account for overall 12% of all pediatric cancers. Despite recent advances in therapeutic modalities, children with tumor metastasis have poor prognosis. Therefore, there is an unmet need for new and effective treatment modalities for pediatric head and neck cancers. The present study describes a simple and efficient method for fabrication of cationic lipid­polymer hybrid nanoparticles (CLPNs) for co­delivery of cisplatin (CDDP) and DNA (CDDP/DNA CLPNs) for the therapy of childhood head and neck cancers. CDDP/DNA CLPNs were prepared by the modified double emulsion solvent evaporation method with self­assembly. CDDP­loaded CLPNs (CDDP CLPNs), CDDP-loaded polymeric nanoparticles (PNPs) (CDDP PNPs), and DNA­loaded Lipofectamine® 2000 (DNA LIPO) were also prepared for comparison. The results illustrated that the concentration of the cationic lipid has influence on the characteristics of CLPNs. In vitro anticancer effect, in vitro transfection efficiency, in vivo antitumor and gene delivery efficacy of CDDP/DNA CLPNs have advantages over other formulations tested. In conclusion, outstanding delivery ability of CLPNs for both CDDP and DNA could combine the therapeutic efficiency of both drug and gene for the treatment of pediatric rhabdomyosarcoma (RMS).


Assuntos
Cisplatino/farmacologia , Terapia Genética , Neoplasias de Cabeça e Pescoço/terapia , Lipídeos/química , Nanopartículas/química , Polímeros/química , Animais , Antineoplásicos/farmacologia , Sobrevivência Celular , Criança , Terapia Combinada , Portadores de Fármacos , Sistemas de Liberação de Medicamentos , Citometria de Fluxo , Imunofluorescência , Neoplasias de Cabeça e Pescoço/genética , Humanos , Camundongos , Camundongos Endogâmicos BALB C , Camundongos Nus , Transfecção , Células Tumorais Cultivadas
19.
Int J Pediatr Otorhinolaryngol ; 85: 56-61, 2016 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-27240497

RESUMO

OBJECTIVE: Waardenburg syndrome is a congenital genetic disorder. It is the most common type of syndromic hearing impairment with highly genetic heterogeneity and proved to be related by 6 genes as follows: PAX3, MITF, SNAI2, EDN3, EDNRB and SOX10. This article aims to identify the genetic causes of a Chinese WS child patient. METHODS: A Chinese WS child was collected for clinical data collection by questionnaire survey. DNA samples of proband and his parents were extracted from peripheral blood samples. Six candidate genes were sequenced by the Trusight One sequencing panel on the illumina NextSeq 500 platform. RESULTS: A novel nonsense heterozygous mutation was found in the coding region of exon 2 in the SOX10 gene of proband. The novel nonsense heterozygous mutation could cause the replacement of the 55th lysine codon by stop codon (484T > C, C142R) and further more possibly cause terminating the protein translation in advance. However, both proband's parents had no mutation of genes above mentioned. CONCLUSION: The gene mutation of SOX10 [NM_006941.3 c.163A > T] is a novel nonsense mutation. No record of this mutation has been found in dbSNP, HGMD, 1000 Genomes Project, ClinVar and ESP6500 databases. It meets the condition of PS2 of strong evidence in 2015 ACMG Standards and Guidelines.


Assuntos
Códon sem Sentido , Fatores de Transcrição SOXE/genética , Síndrome de Waardenburg/genética , Povo Asiático/genética , China , Marcadores Genéticos , Heterozigoto , Humanos , Lactente , Masculino , Síndrome de Waardenburg/diagnóstico , Síndrome de Waardenburg/etnologia
20.
Artigo em Chinês | MEDLINE | ID: mdl-26695978

RESUMO

OBJECTIVE: To evaluate the species, quantity and diffusion of allergenic pollens as well as the relationship among allergic rhinitis (AR), pollen species and meteorological conditions in Kunming area. METHODS: The exposure film was used to investigate the species of airborne pollen, the total number of these pollens during December 2009 to November 2010 by means of gravitational sedimentation, at the same time, AR patients were registered. The species of allergic pollen in Kunming area during the same period, and the statistic analysis was made with the meteorological elements, using the correlation analysis methods of Excel for data analysis. RESULTS: From December 2009 to November 2010, a total of 60 exposure films of pollen species was found, including 26 147 pollens. The annual airborne pollen showed two scattering peak, respectively: February to April and September to October; the number of advantage pollen was 17 species. The number of year-round drifting pollen was 13 species while 2 species showed two peaks on spring and autumn. There was another 26 new species added to the results of 2009-2010, compared with 1987-1989, while the original 12 species were not seen. The drifting peak was the same. The number of allergen intradermal tests (AIT) positive AR patients was positively correlated with 16 pollen species, respectively, oleaceae, alnus nepalensis, walnut, palm, pig weed, fennel, Amaranthaceae, artemisia, rosa, Albizia julibrissin Durazz, gramineae, castor, Fraxinus L, populus, Morus alba L, hemp humulus, (r value were 0.689 7, 0.550 1, 0.742 1, 0.755 2, 0.771 2, 0.663 3, 0.556 1, 0.568 3, 0.659 8, 0.607 4, 0.834 7, 0.664 3, 0.745 9, 0.634 7, 0.718 3, 0.777 2, all P < 0.05). The population of AIT positive AR patients was positively correlated with average temperature, average wind speed and other meteorological factors (r values were 0.552 0, 0.883 5, both P < 0.05), and was negatively correlated with average relative humidity (r = -0.714 7, P < 0.05). CONCLUSIONS: Kunming had a large number of airborne pollen species which showed two peaks annually, respectively, spring and autumn. The relationship among the number of AIT positive AR patients, the meteorological factors and the number of airborne pollen were close.


Assuntos
Alérgenos/análise , Conceitos Meteorológicos , Pólen/classificação , Rinite Alérgica Sazonal/diagnóstico , Estações do Ano , Humanos , Temperatura
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